Homayoun Valafar : rechercher sur Z-Library

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Articles (36)
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Trading pounds for points: Engagement and weight loss in a mobile health intervention

Hales, Sarah, Turner-McGrievy, Gabrielle M, Wilcox, Sara, Davis, Rachel E, Fahim, Arjang, Huhns, Michael, Valafar, Homayoun

Journal:

Digital Health

Année:

2017

Langue:

english

Fichier:

PDF, 365 KB

english, 2017

Assessment of protein alignment using 1H–1H residual dipolar coupling measurements

Junfeng Wang, Homayoun Valafar, James H. Prestegard

Journal:

Journal of Magnetic Resonance

Année:

2005

Langue:

english

Fichier:

PDF, 386 KB

english, 2005

REDCRAFT: A tool for simultaneous characterization of protein backbone structure and motion from RDC data

Michael Bryson, Fang Tian, James H. Prestegard, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Année:

2008

Langue:

english

Fichier:

PDF, 625 KB

english, 2008

Efficient and accurate estimation of relative order tensors from λ-maps

Rishi Mukhopadhyay, Xijiang Miao, Paul Shealy, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Année:

2009

Langue:

english

Fichier:

PDF, 1.65 MB

english, 2009

CCRC-Net: an Internet-based spectral database for complex carbohydrates using artificial neural networks search engines

Faramarz Valafar, Homayoun Valafar

Journal:

TrAC Trends in Analytical Chemistry

Année:

1999

Langue:

english

Fichier:

PDF, 448 KB

english, 1999

Backbone resonance assignment and order tensor estimation using residual dipolar couplings

Paul Shealy, Yizhou Liu, Mikhail Simin, Homayoun Valafar

Journal:

Journal of Biomolecular NMR

Année:

2011

Langue:

english

Fichier:

PDF, 393 KB

english, 2011

REDCAT: a residual dipolar coupling analysis tool

Homayoun Valafar, James H Prestegard

Journal:

Journal of Magnetic Resonance

Année:

2004

Langue:

english

Fichier:

PDF, 1.39 MB

english, 2004

Rapid classification of protein structure models using unassigned backbone RDCs and probability density profile analysis (PDPA)

Sonal Bansal, Xijiang Miao, Michael W.W. Adams, James H. Prestegard, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Année:

2008

Langue:

english

Fichier:

PDF, 419 KB

english, 2008

Estimation of relative order tensors, and reconstruction of vectors in space using unassigned RDC data and its application

Xijiang Miao, Rishi Mukhopadhyay, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Année:

2008

Langue:

english

Fichier:

PDF, 933 KB

english, 2008

Simultaneous structure and dynamics of a membrane protein using REDCRAFT: Membrane-bound form of Pf1 coat protein

Paul Shealy, Mikhail Simin, Sang Ho Park, Stanley J. Opella, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Année:

2010

Langue:

english

Fichier:

PDF, 690 KB

english, 2010

Datamining Protein Structure Databanks for Crystallization Patterns of Proteins

HOMAYOUN VALAFAR, JAMES H. PRESTEGARD, FARAMARZ VALAFAR

Journal:

Annals of the New York Academy of Sciences

Année:

2002

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2002

Assignment of protein backbone resonances using connectivity, torsion angles and13Cαchemical shifts

Laura C. Morris, Homayoun Valafar, James H. Prestegard

Journal:

Journal of Biomolecular NMR

Année:

2004

Langue:

english

Fichier:

PDF, 220 KB

english, 2004

Predicting the effectiveness of hydroxyurea in individual sickle cell anemia patients

Homayoun Valafar, Faramarz Valafar, Alan Darvill, Peter Albersheim, Abdullah Kutlar, Kristy F. Woods, John Hardin

Journal:

Artificial Intelligence in Medicine

Année:

2000

Langue:

english

Fichier:

PDF, 414 KB

english, 2000

An artificial neural network approach to improving the correlation between protein energetics and the backbone structure

Fawcett, Timothy M., Irausquin, Stephanie J., Simin, Mikhail, Valafar, Homayoun

Journal:

PROTEOMICS

Année:

2013

Langue:

english

Fichier:

PDF, 747 KB

english, 2013

Multiple structure alignment with msTALI

Paul Shealy, Homayoun Valafar

Journal:

BMC Bioinformatics

Année:

2012

Langue:

english

Fichier:

PDF, 896 KB

english, 2012

[Annual Reports on NMR Spectroscopy] Annual Reports on NMR Spectroscopy Volume 76 Volume 76 || A Review of REDCRAFT

Valafar, Homayoun

Année:

2012

Langue:

english

Fichier:

PDF, 1.71 MB

english, 2012

Advances in the REDCAT software package

Chris Schmidt,Stephanie J Irausquin,Homayoun Valafar

Journal:

BMC Bioinformatics

Année:

2013

Langue:

english

Fichier:

PDF, 1.12 MB

english, 2013

A Dipolar Coupling Based Strategy for Simultaneous Resonance Assignment and Structure Determination of Protein Backbones

Tian, Fang, Valafar, Homayoun, Prestegard, James H.

Journal:

Journal of the American Chemical Society

Année:

2001

Langue:

english

Fichier:

PDF, 148 KB

english, 2001

NMR Structural Studies Reveal a Novel Protein Fold for MerB, the Organomercurial Lyase Involved in the Bacterial Mercury Resistance System †,‡

Di Lello, Paola, Benison, Gregory C., Valafar, Homayoun, Pitts, Keith E., Summers, Anne O., Legault, Pascale, Omichinski, James G.

Journal:

Biochemistry

Année:

2004

Langue:

english

Fichier:

PDF, 523 KB

english, 2004

Phage-Induced Alignment of Membrane Proteins Enables the Measurement and Structural Analysis of Residual Dipolar Couplings with Dipolar Waves and λ-Maps

Park, Sang Ho, Son, Woo Sung, Mukhopadhyay, Rishi, Valafar, Homayoun, Opella, Stanley J.

Journal:

Journal of the American Chemical Society

Année:

2009

Langue:

english

Fichier:

PDF, 813 KB

english, 2009

[IEEE 2011 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Atlanta, GA, USA (2011.11.12-2011.11.15)] 2011 IEEE International Conference on Bioinformatics and Biomedicine - An Artificial Neural Network Based Approach for Identification of Native Protein Structures Using an Extended Forcefield

Fawcett, Timothy Matthew, Irausquin, Stephanie, Simin, Mikhail, Valafar, Homayoun

Année:

2011

Fichier:

PDF, 394 KB

2011

DYNAFOLD: A DYNAMIC PROGRAMMING APPROACH TO PROTEIN BACKBONE STRUCTURE DETERMINATION FROM MINIMAL SETS OF RESIDUAL DIPOLAR COUPLINGS

MUKHOPADHYAY, RISHI, IRAUSQUIN, STEPHANIE, SCHMIDT, CHRISTOPHER, VALAFAR, HOMAYOUN

Journal:

Journal of Bioinformatics and Computational Biology

Année:

2014

Langue:

english

Fichier:

PDF, 455 KB

english, 2014

Improvements to REDCRAFT: a software tool for simultaneous characterization of protein backbone structure and dynamics from residual dipolar couplings

Simin, Mikhail, Irausquin, Stephanie, Cole, Casey A., Valafar, Homayoun

Journal:

Journal of Biomolecular NMR

Année:

2014

Langue:

english

Fichier:

PDF, 4.47 MB

english, 2014

TALI: LOCAL ALIGNMENT OF PROTEIN STRUCTURES USING BACKBONE TORSION ANGLES

MIAO, XIJIANG, WADDELL, PETER J., VALAFAR, HOMAYOUN

Journal:

Journal of Bioinformatics and Computational Biology

Année:

2008

Langue:

english

Fichier:

PDF, 2.40 MB

english, 2008

Structure Calculation and Reconstruction of Discrete State Dynamics from Residual Dipolar Couplings

Cole, Casey Anne, Mukhopadhyay, Rishi, Omar, Hanin, Hennig, Mirko, Valafar, Homayoun

Journal:

Journal of Chemical Theory and Computation

Année:

2016

Langue:

english

Fichier:

PDF, 4.55 MB

english, 2016

Social networks for improving healthy weight loss behaviors for overweight and obese adults: A randomized clinical trial of the social pounds off digitally (Social POD) mobile app

Hales, Sarah, Turner-McGrievy, Gabrielle M., Wilcox, Sara, Fahim, Arjang, Davis, Rachel E., Huhns, Michael, Valafar, Homayoun

Journal:

International Journal of Medical Informatics

Année:

2016

Langue:

english

Fichier:

PDF, 806 KB

english, 2016

[IEEE 2017 IEEE EMBS International Conference on Biomedical & Health Informatics (BHI) - Orland, FL, USA (2017.2.16-2017.2.19)] 2017 IEEE EMBS International Conference on Biomedical & Health Informatics (BHI) - Resolving ambiguities in accelerometer data due to location of sensor on wrist in application to detection of smoking gesture

Cole, Casey A., Thrasher, James F., Strayer, Scott M., Valafar, Homayoun

Année:

2017

Langue:

english

Fichier:

PDF, 1.64 MB

english, 2017

[IEEE 2018 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) - Saint Louis, MO, USA (2018.5.30-2018.6.2)] 2018 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) - Application of ensemble learning to the differential gene expression in left-right breast tumors

Cole, Casey A., Nesbitt, Kenneth L., Valafar, Homayoun

Année:

2018

Langue:

english

Fichier:

PDF, 277 KB

english, 2018

Protein Structure Validation and Identification from Unassigned Residual Dipolar Coupling Data Using 2D-PDPA

Fahim, Arjang, Mukhopadhyay, Rishi, Yandle, Ryan, Prestegard, James, Valafar, Homayoun

Journal:

Molecules

Année:

2013

Langue:

english

Fichier:

PDF, 1.59 MB

english, 2013

Designing and executing a functional exercise to test a novel informatics tool for mass casualty triage

Donevant, Sara B, Svendsen, Erik R, Richter, Jane V, Tavakoli, Abbas S, Craig, Jean B r, Boltin, Nicholas D, Valafar, Homayoun, DiNardi, Salvatore Robert, Culley, Joan M

Journal:

Journal of the American Medical Informatics Association

Année:

2019

Langue:

english

Fichier:

PDF, 605 KB

english, 2019

Acute Sleep Deprivation During Pregnancy in Rats: Rapid Elevation of Placental and Fetal Inflammation and Kynurenic Acid

Baratta, Annalisa M., Kanyuch, Nickole R., Cole, Casey A., Valafar, Homayoun, Deslauriers, Jessica, Pocivavsek, Ana

Journal:

Neurobiology of Stress

Année:

2019

Fichier:

PDF, 1.90 MB

2019

[IEEE 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - San Diego, CA, USA (2019.11.18-2019.11.21)] 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Evaluating Precisicon and Recall through the Utility of msTALI via an Active Site Study on Fold Families

McFarland, Devaun, Bullock, Caroline, Valafar, Homayoun

Année:

2019

Fichier:

PDF, 286 KB

2019

[IEEE 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - Las Vegas, NV, USA (2019.12.5-2019.12.7)] 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - State Transition Modeling of the Smoking Behavior Using LSTM Recurrent Neural Networks

Odhiambo, Chrisogonas O., Cole, Casey A., Torkjazi, Alaleh, Valafar, Homayoun

Année:

2019

Fichier:

PDF, 535 KB

2019

[IEEE 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - Las Vegas, NV, USA (2019.12.5-2019.12.7)] 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - Automated Analysis of Femoral Artery Calcification Using Machine Learning Techniques

Zhao, Liang, Odigwe, Brendan, Lessner, Susan, Clair, Daniel, Mussa, Firas, Valafar, Homayoun

Année:

2019

Fichier:

PDF, 409 KB

2019

[IEEE 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - Las Vegas, NV, USA (2019.12.5-2019.12.7)] 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - PDBMine: A Reformulation of the Protein Data Bank to Facilitate Structural Data Mining

Cole, Casey, Ott, Christopher, Valdes, Diego, Valafar, Homayoun

Année:

2019

Fichier:

PDF, 489 KB

2019

Increased usability, algorithmic improvements and incorporation of data mining for structure calculation of proteins with REDCRAFT software package

Cole, Casey, Parks, Caleb, Rachele, Julian, Valafar, Homayoun

Journal:

BMC Bioinformatics

Année:

2020

Fichier:

PDF, 1.49 MB

2020